2024
Polycarbonate Ultracentrifuge Tube Re-Use in Proteomic Analyses of Extracellular Vesicles
Cahalane RME, Turner ME, Clift CL, Blaser MC, Bogut G, Levy S, Kasai T, Driedonks TAP, Nolte-‘t Hoen ENM, Aikawa M, Singh SA, Aikawa E, Journal of Visualized Experiments, 8 March 2024ELISA‐based detection of immunoglobulins against extracellular vesicles in blood plasma, Driedonks TAP, Jiang L, Gololobova O, Liao Z, Witwer KW, Journal of Extracellular Biology, 7 March 2024
Minimal information for studies of extracellular vesicles (MISEV2023): From basic to advanced approaches,
Welsh JA, Gobherdhan DCI, O’Driscoll, (…) , Driedonks TAP, (…) MISEV Consortium, Théry C, Witwer KW, Journal of Extracellular Vesicles, 7 February 2024
Viral and host small RNA transcriptome analysis of SARS-CoV-1 and SARS-CoV-2-infected human cells reveals novel viral short RNAs,
Driedonks TAP, Nyberg LH, Conte A, Ma Z, Pekosz A, Duban E, Tonevitsky A, Sültmann H, Turchinovich A, Witwer KW, Heliyon, 15 February 2024
Intracellular localisation and extracellular release of Y RNA and Y RNA binding proteins, Driedonks TAP, Ressel S, Tran Ngoc Minh T, Buck AH, Nolte-‘t Hoen ENM, Journal of Extracellular Biology, 16 January 2024
Rigor and reproducibility of RNA sequencing analyses,
Buschmann D, Driedonks TAP, Huang Y, Turchinovich A, Witwer KW, Rigor and Reproducibility in Genetics and Genomics (book chapter), 1 January 2024
2023
Small RNA Profiles of Brain Tissue-Derived Extracellular Vesicles in Alzheimer’s Disease,
Huang Y, Driedonks TAP, Cheng L, Turchinovich A, Pletniková O, Redding-Ochoa J, Troncoso JC, Hill AF, Mahairaki V, Zheng L, Witwer KW, Journal of Alzheimer’s Disease, 28 September 2023
Maternal allergic sensitization affects the T cell modulatory capacity and molecular cargo of milk derived extracellular vesicles,
Van Herwijnen M, Giovanazzi A, Zonneveld MI, Maqueda JJ, Kleinjan M, Goerdayal S, Vollmy F, van Bruggen-de Haan A, Driedonks TAP, Arkesteijn GJA, van Elburg RM, van der Meulen GN, Garssen J, Oliveira C, Altelaar AFM, ‘t Hoen PAC, Redegeld FA, Nolte-‘t Hoen ENM, Wauben MHM, bioRxiv, 15 August 2023
Editorial: Molecular imaging for tracking drug delivery,
Han Z, Driedonks TAP, Tang W, Zhou , McNally L, Frontiers in Pharmacology, 18 May 2023
An ex vivo model of interactions between extracellular vesicles and peripheral mononuclear blood cells in whole blood,
Rodriguez BV, Wen Y, Shirk EN, Vazquez S, Gololobova O, Maxwell A, Plunkard J, Castell NV, Carlson B, Queen SE, Izzi JM, Driedonks TAP, Witwer KW, Journal of Extracellular Vesicles 12, 14 May 2023
2022
Pharmacokinetics and biodistribution of extracellular vesicles administered intravenously and intranasally to Macaca nemestrina,
Driedonks TAP*, Jiang L*, Carlson B, Han Z, Liu G, Queen SE, Shirk EN, Gololobova O, Liao Z, Nyberg LH, Lima G, Paniushkina L, Garcia-Contreras M, Schonvisky K, Castell N, Stover M, Guerrero-Martin S, Richardson R, Smith B, Mahairaki V, Lai CP, Izzi JM, Hutchinson EK, Pate KAM, Witwer KW, J. Extracell. Biology, 13 August 2022
* shared first-authorship
A bacterial extracellular vesicle-based intranasal vaccine against SARS-CoV-2 protects against disease and elicits neutralizing antibodies to wild-type and Delta variants,
Jiang L*, Driedonks TAP*, Jong WSP, Dhakal S, Bart van den Berg van Saparoea H, Sitaras I, Zhou R, Caputo C, Littlefield K, Lowman M, Chen M, Lima G, Gololobova O, Smith B, Mahairaki V, Richardson MR, Mulka KR, Lane AP, Klein SL, Pekosz A, Brayton C, Mankowski JL, Luirink J, Villano JS, Witwer KW, Journal of Extracellular Vesicles, 14 March 2022
*shared first-authorship
Relationships of APOE Genotypes With Small RNA and Protein Cargo of Brain Tissue Extracellular Vesicles From Patients With Late-Stage AD,
Huang Y*, Driedonks TAP*, Cheng L, Rajapaksha H, Turchinovich A, Routenberg DA, Nagaraj R, Redding-Ochoa J, Arab T, Powell BH, Pletnikova O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW, Neurology Genetics, December 2022
* shared first-authorship
Brain Tissue-Derived Extracellular Vesicles in Alzheimer’s Disease Display Altered Key Protein Levels Including Cell Type-Specific Markers,
Huang Y, Driedonks TAP, Cheng L, Rajapaksha H, Routenberg DA, Nagaraj R, Redding J, Arab T, Powell BH, Pletniková O, Troncoso JC, Zheng L, Hill AF, Mahairaki V, Witwer KW, J. Alzheimers Dis., 1 Oct 2022
Viral and host small RNA transcriptome analysis of SARS-CoV-1 and SARS-CoV-2-infected human cells reveals novel viral short RNAs,
Driedonks TAP, Nyberg LH, Conte A, Ma Z, Pekosz A, Duban E, Sültmann H, Turchinovich A, Witwer KW, biorXiv, 27 December 2022
2021
CDC6: A novel canine tumour biomarker detected in circulating extracellular vesicles,
Andriessen A, Bongiovanni L, Driedonks TAP, van Liere E, Seijger A, Hegeman CV, van Nimwegen SA, Galac S, Westendorp B, Nolte-‘t Hoen ENM, de Bruin A, Vet. Comp Oncol, 07 November 2021
Highly efficient magnetic labeling allows MRI tracking of the homing of stem cell-derived extracellular vesicles following systemic delivery,
Han Z, Liu S, Pei Y, Ding Z, Li Y, Wang X, Zhan D, Xia S, Driedonks TAP, Witwer KW, Weiss RG, van Zijl PCM, Bulte JWM, Cheng L, Liu G, Journal of Extracellular Vesicles, Vol 10, Jan 2021
2020
How does an RNA selfie work? EV-associated RNA in innate immunity as self or danger,
Xiao Y, Driedonks TAP, Witwer KW, Wang Q, Yin H, Journal of Extracellular Vesicles, Vol. 9, Jul 2020
Y-RNA subtype ratios in plasma extracellular vesicles are cell type specific and are candidate biomarkers for inflammatory diseases,
Driedonks TAP, Mol S, de Bruin S, Peters AL, Zhang X, Lindenbergh MFS, Beuger BM, van Stalborch AD, Spaan T, de Jong EC, van der Vries E, Margadant C, van Bruggen R, Vlaar APJ, Groot Kormelink T, Nolte-‘t Hoen ENM, Journal of Extracellular Vesicles, Vol. 9, May 2020
2019
Response to letter to the editor,
Driedonks TAP, Nolte-‘t Hoen ENM, Journal of Extracellular Vesicles, Vol. 8., April 2019
Bystander T-cells support clonal T-cell activation by controlling the release of dendritic cell-derived immune-stimulatory extracellular vesicles,
Lindenbergh MFS, Koerhuis DGJ, Borg EGF, van ‘t Veld EM, Driedonks TAP, Wubbolts R, Stoorvogel W, Boes M, Frontiers in Immunology, Vol. 10, March 2019
Circulating Y-RNA in extracellular vesicles and ribonucleoprotein complexes; implications for the immune system, Driedonks TAP, Nolte-‘t Hoen ENM, Frontiers in Immunology, Vol 9, January 2019
2018
Minimal information for studies of extracellular vesicles 2018 (MISEV2018): a position statement of the international society for extracellular vesicles and update of the MISEV2014 guidelines,
Théry C, Witwer KW, (…), Driedonks TAP (…), Zuba-Surma EK, Journal of Extracellular Vesicles, Vol. 8, Nov 2018
Technical approaches to reduce interference of Fetal Calf Serum derived RNA in the analysis of extracellular vesicle RNA from cultured cells,
Driedonks TAP, Nijen-Twilhaar MK, Nolte-’t Hoen ENM, Journal of Extracellular Vesicles, Vol. 8, December 2018
Immune stimuli shape the small non-coding transcriptome of extracellular vesicles released by dendritic cells, Driedonks TAP, van der Grein SG, Ariyurek Y, Buermans HPJ, Jekel H, Chow FWN, Wauben MHM, Buck AH, ‘t Hoen PAC, Nolte-‘t Hoen ENM, Cellular and Molecular Life Sciences, Vol 75, May 2018
Abundantly present miRNAs in milk-derived extracellular vesicles are conserved between mammals,
Van Herwijnen MJC, Driedonks TAP, Snoek BL, Kroon AMT, Kleinjan M, Jorritsma R, Pieterse CMJ, Nolte-‘t Hoen ENM, Wauben MHM, Frontiers in Nutrition, Vol. 5, September 2018
Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling,
Giraldez MD, Spengler RM, Etheridge A, Godoy PM, Barczak AJ, Srinivasan S, De Hoff PL, Tanriverdi K, Courtright A, Lu S, Khoory J, Rubio R, Baxter D, Driedonks TAP, Buermans HPJ, Nolte-‘t Hoen ENM, Jiang H, Wang K, Ghiran I, Wang Y, Van Keuren-Jensen K, Freedman JE, Woodruff PG, Laurent LC, Erle DJ, Galas DJ, Tewari M,
Nature Biotechnology, May 2018
2017
Obstacles and opportunities in the functional analysis of extracellular vesicle RNA – an ISEV position paper, Mateescu B, Kowal EJK, (…), Driedonks TAP, (…), Nolte-’t Hoen ENM, Journal of Extracellular Vesicles, Vol. 6, Mar 2017
EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research,
van Deun J,(…), Driedonks TAP, (…), Hendrix A, Nature Methods, Vol 14, Issue 3, 2017
Tom Driedonks 